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1.
Parasitol Res ; 123(1): 104, 2024 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-38240890

RESUMO

Tetrahymenosis is caused by the ciliated protozoan Tetrahymena and is responsible for serious economic losses to the aquaculture industry worldwide. However, information regarding the molecular mechanism leading to tetrahymenosis is limited. In previous transcriptome sequencing work, it was found that one of the two ß-tubulin genes in T. pyriformis was significantly expressed in infected fish, we speculated that ß-tubulin is involved in T. pyriformis infecting fish. Herein, the potential biological function of the ß-tubulin gene in Tetrahymena species when establishing infection in guppies was investigated by cloning the full-length cDNA of this T. pyriformis ß-tubulin (BTU1) gene. The full-length cDNA of T. pyriformis BTU1 gene was 1873 bp, and the ORF occupied 1134 bp, whereas 5' UTR 434 bp, and 3' UTR 305 bp whose poly (A) tail contained 12 bases. The predicted protein encoded by T. pyriformis BTU1 gene had a calculated molecular weight of 42.26 kDa and pI of 4.48. Moreover, secondary structure analysis and tertiary structure prediction of BTU1 protein were also conducted. In addition, morphology, infraciliature, phylogeny, and histopathology of T. pyriformis isolated from guppies from a fish market in Harbin were also investigated. Furthermore, qRT-PCR analysis and experimental infection assays indicated that the expression of BTU1 gene resulted in efficient cell proliferation during infection. Collectively, our data revealed that BTU1 is a key gene involved in T. pyriformis infection in guppies, and the findings discussed herein provide valuable insights for future studies on tetrahymenosis.


Assuntos
Poecilia , Tetrahymena pyriformis , Tetrahymena , Animais , Tubulina (Proteína)/genética , Tubulina (Proteína)/metabolismo , Tetrahymena/genética , Poecilia/genética , DNA Complementar/metabolismo , Tetrahymena pyriformis/genética , Tetrahymena pyriformis/metabolismo , RNA Mensageiro/metabolismo
2.
Comput Biol Med ; 169: 107880, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38211383

RESUMO

It is challenging to model the toxicity of nitroaromatic compounds due to limited experimental data. Nitrobenzene derivatives are commonly used in industry and can lead to environmental contamination. Extensive research, including several QSPR studies, has been conducted to understand their toxicity. Predictive QSPR models can help improve chemical safety, but their limitations must be considered, and the molecular factors affecting toxicity should be carefully investigated. The latest QSPR methods, molecular modeling techniques, machine learning algorithms, and computational chemistry tools are essential for developing accurate and robust models. In this work, we used these methods to study a series of fifty compounds derived from nitrobenzene. The Monte Carlo approach was used for QSPR modeling by applying the SMILES molecular structure representation and optimal molecular descriptors. The correlation ideality index (CII) and correlation contradiction index (CCI) were further introduced as validation parameters to estimate the developed models' predictive ability. The statistical quality of the CII models was better than those without CII. The best QSPR model with the following statistical parameters (Split-3): (R2 = 0.968, CCC = 0.984, IIC = 0.861, CII = 0.979, Q2 = 0.954, QF12 = 0.946, QF22 = 0.938, QF32 = 0.947, Rm2 = 0.878, RMSE = 0.187, MAE = 0.151, FTraining = 390, FInvisible = 218, FCalibration = 240, RTest2 = 0.905) was selected to generate the studied promoters with increasing and decreasing activity.


Assuntos
Tetrahymena pyriformis , Modelos Moleculares , Nitrobenzenos , Método de Monte Carlo , Relação Quantitativa Estrutura-Atividade
3.
SAR QSAR Environ Res ; 35(1): 11-30, 2024 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-38193248

RESUMO

A series of diverse organic compounds impose serious detrimental effects on the health of living organisms and the environment. Determination of the structural aspects of compounds that impart toxicity and evaluation of the same is crucial before public usage. The present study aims to determine the structural characteristics of compounds for Tetrahymena pyriformis toxicity using the q-RASTR (Quantitative Read Across Structure-Toxicity Relationship) model. It was developed using RASTR and 2-D descriptors for a dataset of 1792 compounds with defined endpoint (pIGC50) against a model organism, T. pyriformis. For the current study, the whole dataset was divided based on activity/property into the training and test sets, and the q-RASTR model was developed employing six descriptors (three latent variables) having r2, Q2F1 and Q2 values of 0.739, 0.767, and 0.735, respectively. The generated model was thoroughly validated using internationally recognized internal and external validation criteria to assess the model's dependability and predictability. It was highlighted that high molecular weight, aromatic hydroxyls, nitrogen, double bonds, and hydrophobicity increase the toxicity of organic compounds. The current study demonstrates the applicability of the RASTR algorithm in QSTR model development for the prediction of toxic chemicals (pIGC50) towards T. pyriformis.


Assuntos
Relação Quantitativa Estrutura-Atividade , Tetrahymena pyriformis , Algoritmos , Compostos Orgânicos/toxicidade
4.
Environ Sci Process Impacts ; 25(7): 1181-1192, 2023 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-37376996

RESUMO

Human adenoviruses are ubiquitous contaminants of surface water. Indigenous protists may interact with adenoviruses and contribute to their removal from the water column, though the associated kinetics and mechanisms differ between protist species. In this work, we investigated the interaction of human adenovirus type 2 (HAdV2) with the ciliate Tetrahymena pyriformis. In co-incubation experiments in a freshwater matrix, T. pyriformis was found to efficiently remove HAdV2 from the aqueous phase, with ≥4 log10 removal over 72 hours. Neither sorption onto the ciliate nor secreted compounds contributed to the observed loss of infectious HAdV2. Instead, internalization was shown to be the dominant removal mechanism, resulting in the presence of viral particles inside food vacuoles of T. pyriformis, as visualized by transmission electron microscopy. The fate of HAdV2 once ingested was scrutinized and no evidence of virus digestion was found over the course of 48 hours. This work shows that T. pyriformis can exert a dual role in microbial water quality: while they remove infectious adenovirus from the water column, they can also accumulate infectious viruses.


Assuntos
Adenovírus Humanos , Tetrahymena pyriformis , Humanos , Tetrahymena pyriformis/fisiologia , Água Doce , Microscopia Eletrônica de Transmissão , Adenoviridae
5.
SAR QSAR Environ Res ; 34(2): 147-161, 2023 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-36749040

RESUMO

Quantitative structure-activity relationship (QSAR) is important for safe, rapid and effective risk assessment of chemicals. In this study, two QSAR models were established with 1230 chemicals to predict toxicity towards Tetrahymena pyriformis using multiple linear regression (MLR) method. The topological(T)-QSAR model was developed by using topological-norm descriptors generated from the topological structure, and the spatial(S)-QSAR model were built with spatial-norm descriptors obtained from the three-dimensional structure of molecules and topological-norm descriptors. The r2training and r2test are 0.8304 and 0.8338 for the T-QSAR model, and 0.8485 and 0.8585 for the S-QSAR model, which means that T-QSAR model and S-QSAR model can be used to predict toxicity quickly and accurately. In addition, we also conducted validation on the developed models. Satisfying validation results and statistical parameters demonstrated that QSAR models based on the topological-norm descriptors and spatial-norm descriptors proposed in this paper could be further utilized to estimate the toxicity of chemicals towards Tetrahymena pyriformis.


Assuntos
Relação Quantitativa Estrutura-Atividade , Tetrahymena pyriformis , Análise de Regressão , Modelos Lineares
6.
Toxicol Mech Methods ; 33(3): 222-232, 2023 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-36042574

RESUMO

The Health and environmental hazards of benzene and nitrobenzene (NB) derivatives have remained a topic of interest of researchers. In silico methods for prediction of toxicity of chemicals have proved their worth in accurate forecast of environmental as well as health toxicity and are strongly recommended by regulatory authorities. Two quantitative structure-toxicity relationship (QSTR) models explaining Scenedesmus obliquus toxicity trends among 39 benzene derivatives and Tetrahymena pyriformis toxicity of 103 NB and 392 benzene derivatives are developed using semiempirical quantum chemical parameters. The best constructed QSTR models have good fitting ability (R2 = 0.8053, 0.7591, and 0.8283) and robustness (Q2LOO = 0.7507, 0.7227, and 0.8194; Q2LMO = 0.7338, 0.7153, and 0.8172). The external predictivity of all the models are quite good (R2EXT = 0.8256, 0.9349, and 0.8698). Electronegativity, Cosmo volume, total energy, and molecular weight are responsible for the increase and decrease of toxicity of benzene derivatives against S. obliquus while electronegativity, electrophilicity index, the heat of formation, total energy, hydrophobicity, and cosmo volume are responsible for modulation of toxicity of NB and benzene derivatives toward T. pyriformis. These models fulfill the requirements of all the five OECD principles.


Assuntos
Derivados de Benzeno , Tetrahymena pyriformis , Derivados de Benzeno/química , Derivados de Benzeno/toxicidade , Relação Quantitativa Estrutura-Atividade , Nitrobenzenos
7.
Toxicology ; 480: 153325, 2022 10.
Artigo em Inglês | MEDLINE | ID: mdl-36115645

RESUMO

The random forest (RF) algorithm, together with ten Dragon descriptors, was used to develop a quantitative structure-toxicity/activity relationship (QSTR/QSAR) model for a larger data set of 1792 chemical toxicity pIGC50 towards Tetrahymena pyriformis. The optimal RF (ntree =300 and mtry =3) model yielded root mean square (rms) errors of 0.261 for the training set (1434 chemicals) and 0.348 for the test set (358 chemicals). Compared with other QSTR models reported in the literature, the optimal RF model in this paper is more accurate. The feasibility of applying the RF algorithm to predict chemical toxicity pIGC50 towards Tetrahymena pyriformis has been verified.


Assuntos
Tetrahymena pyriformis , Algoritmos , Relação Quantitativa Estrutura-Atividade
8.
Molecules ; 27(18)2022 Sep 19.
Artigo em Inglês | MEDLINE | ID: mdl-36144862

RESUMO

Chitosan, chitooligosaccharides and their derivatives' production and use in many fields may result in their release to the environment, possibly affecting aquatic organisms. Both an experimental and a computational approach were considered for evaluating the effects of these compounds on Lemna minor. Based on the determined EC50 values against L. minor, only D-glucosamine hydrochloride (EC50 = 11.55 mg/L) was considered as "slightly toxic" for aquatic environments, while all the other investigated compounds, having EC50 > 100 mg/L, were considered as "practically non-toxic". The results obtained in the experimental approach were in good agreement with the predictions obtained using the admetSAR2.0 computational tool, revealing that the investigated compounds were not considered toxic for crustacean, fish and Tetrahymena pyriformis aquatic microorganisms. The ADMETLab2.0 computational tool predicted the values of IGC50 for Tetrahymena pyriformis and the LC50 for fathead minnow and Daphnia magna, with the lowest values of these parameters being revealed by totally acetylated chitooligosaccharides in correlation with their lowest solubility. The effects of the chitooligosaccharides and chitosan on L. minor decreased with increased molecular weight, increased with the degree of deacetylation and were reliant on acetylation patterns. Furthermore, the solubility mainly influenced the effects on the aqueous environment, with a higher solubility conducted to lower toxicity.


Assuntos
Araceae , Quitosana , Tetrahymena pyriformis , Poluentes Químicos da Água , Animais , Quitosana/farmacologia , Glucosamina/farmacologia , Oligossacarídeos , Poluentes Químicos da Água/farmacologia
9.
Ecotoxicol Environ Saf ; 242: 113940, 2022 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-35999760

RESUMO

It has become a top global regulatory priority to prevent and control pollution from the release of synthetic chemicals, which continues to affect the aquatic communities. In the past decades, computational tools were largely used to significantly reduce the budget and time cost of chemical acute aquatic toxicity assessment. But the structural basis of toxic compounds was rarely analyzed. In the present study, we collected 1438, 485 and 961 chemicals with acute toxicity data records for three representative aquatic species, including Tetrahymena pyriformis, Daphnia magna, and Fathead minnow, respectively. A series of artificial intelligence models were developed using OCHEM tools. For each aquatic toxicity endpoint, a consensus model was developed based on the top performed individual models. The consensus models provided good performance on external validation sets with total accuracy values 96.88 %, 90.63 %, and 84.90 % for Tetrahymena pyriformis toxicity (TPT), Daphnia magna toxicity (DMT), and Fathead minnow toxicity (FMT), respectively. The models can be freely accessed via https://ochem.eu/article/146910. Moreover, the analysis of physical-chemical properties suggested that several key molecular properties of aquatic toxic compounds were significantly different with those of non-toxic compounds. Thus, these descriptors may be associated to chemical acute aquatic toxicity, and may be useful for the understand of chemical aquatic toxicity. Besides, in this study, the structural alerts for aquatic toxicity were detected using f-score and frequency ratio analysis of predefined substructures. A total of 112, 58 and 33 structural alerts were identified responsible for TPT, DMT, and FMT, respectively. These structural alerts could provide useful information for the mechanisms of chemical aquatic toxicity and visual alerts for environmental assessment. All the structural alerts were integrated in the web-server SApredictor (www.sapredictor.cn).


Assuntos
Cyprinidae , Tetrahymena pyriformis , Poluentes Químicos da Água , Animais , Inteligência Artificial , Daphnia , Relação Quantitativa Estrutura-Atividade , Poluentes Químicos da Água/toxicidade
10.
Curr Microbiol ; 79(9): 279, 2022 Aug 03.
Artigo em Inglês | MEDLINE | ID: mdl-35920924

RESUMO

The main purpose of this study was to investigate the protective effect of Rosmarinus officinalis, Origanum compactum, Lavandula angustifolia, and Eucalyptus globulus essential oils (EOs) against gamma-radiation-induced damages on Tetrahymena pyriformis growing in presence of cobalt-60 source. The chemical composition of the 4 EOs was analyzed by gas chromatography-mass spectrometry. The protective effects of EOs on growth, on morphology, and on some metabolic enzymes and antioxidant markers have been evaluated. Thus, addition of EOs significantly improves the growth parameters (generation number and time) in irradiating conditions. All EOs allowed restoring growth parameters over more than 90% compared to the controls. The morphological analysis indicated that T. pyriformis cells growing in irradiating conditions were able to regain their normal form in presence of the different EOs. Our results indicate that the 4 EOs also have protective effects on some metabolic enzymes. They allowed recovering totally or partially the glyceraldehyde 3-phosphate dehydrogenase and the succinate dehydrogenase activities compared to the controls. Moreover, the addition of EOs reduced the lipid peroxidation level and decreased the activities of catalase and superoxide dismutase induced by the gamma-radiation exposure. A more pronounced protective effect was found for O. compactum and L. angustifolia EOs compared to R. officinalis and E. globulus EOs. These results suggest that the studied EOs are efficient natural antioxidants that could offer protection against gamma-radiation-induced damages and can therefore be useful in clinical medicine.


Assuntos
Óleos Voláteis , Rosmarinus , Tetrahymena pyriformis , Antioxidantes/química , Antioxidantes/farmacologia , Radioisótopos de Cobalto , Óleos Voláteis/química , Óleos Voláteis/farmacologia , Rosmarinus/química
11.
Environ Toxicol Pharmacol ; 95: 103954, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-35948183

RESUMO

Per-/Poly- fluoroalkyl substances represent emerging persistent organic pollutants. Their toxic effects can be broad, yet little attention has been given to organisms at the microscale. To address this knowledge shortfall, the unicellular eukaryote Tetrahymena pyriformis was exposed to increasing concentrations (0-5000 µM) of PFOA/PFOS and monitored for cellular motility, division and function (i.e., phagocytosis), reactive oxygen species generation and total protein levels. Both PFOA/PFOS exposure had negative impacts on T. pyriformis, including reduced motility, delayed cell division and oxidative imbalance, with each chemical having distinct toxicological profiles. T. pyriformis represents a promising candidate for assessing the biological effects these emerging anthropogenically-derived contaminants in a freshwater setting.


Assuntos
Ácidos Alcanossulfônicos , Fluorocarbonos , Tetrahymena pyriformis , Ácidos Alcanossulfônicos/toxicidade , Caprilatos/toxicidade , Eucariotos , Fluorocarbonos/toxicidade , Poluentes Orgânicos Persistentes , Espécies Reativas de Oxigênio
12.
FEMS Microbiol Lett ; 369(1)2022 08 19.
Artigo em Inglês | MEDLINE | ID: mdl-35883218

RESUMO

Worldwide, Aeromonas salmonicida is a major bacterial pathogen of fish in both marine and freshwater environments. Despite psychrophilic growth being common for this species, the number of characterized mesophilic strains is increasing. Thus, this species may serve as a model for the study of intraspecies lifestyle diversity. Although bacteria are preyed upon by protozoan predators, their interaction inside or outside the phagocytic pathway of the predator can provide several advantages to the bacteria. To correlate intraspecies diversity with predation outcome, we studied the fate of psychrophilic and mesophilic strains of A. salmonicida cocultured with the ciliate Tetrahymena pyriformis. A total of three types of outcome were observed: digestion, resistance to phagocytosis, and pathogenicity. The psychrophilic strains are fully digested by the ciliate. In contrast, the mesophilic A. salmonicida subsp. pectinolytica strain is pathogenic to the ciliate. All the other mesophilic strains display mechanisms to resist phagocytosis and/or digestion, which allow them to survive ciliate predation. In some cases, passage through the phagocytic pathway resulted in a few mesophilic A. salmonicida being packaged inside fecal pellets. This study sheds light on the great phenotypic diversity observed in the complex range of mechanisms used by A. salmonicida to confront a predator.


Assuntos
Aeromonas salmonicida , Aeromonas , Doenças dos Peixes , Tetrahymena pyriformis , Aeromonas salmonicida/genética , Animais , Doenças dos Peixes/microbiologia , Peixes , Virulência
13.
Dokl Biochem Biophys ; 503(1): 98-103, 2022 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-35538287

RESUMO

To search for compounds with antiprotozoal activity, effects of snake venoms on the ciliates Tetrahymena pyriformis was studied. T. pyriformis from subkingdom of Protozoa, including the protozoal pathogens, was used as a model organism to select the venoms that are the most active against parasitic protozoans. Various concentrations of venoms were added to the cells, and the cells that survived after 24 h were counted. Among the six snake species from the Viperidae family, the venom of the viper Vipera berus, which completely killed the cells at 49 µg/mL, was the most active. Among four species from the Elapidae family, the previously studied cobra venoms containing cytotoxins with strong antiprotozoal activity as well as the venom of krait Bungarus multicinctus (10 µg/mL) were the most active. The venoms of the pit vipers and Nikolsky's viper did not show any activity at 12.5 mg/mL. Thus, the venoms of V. berus and B. multicinctus are promising for the isolation of new antiprotozoal compounds.


Assuntos
Tetrahymena pyriformis , Viperidae , Animais , Bungarus , Venenos Elapídicos , Elapidae , Venenos de Serpentes , Venenos de Víboras
14.
Environ Sci Technol ; 56(7): 4062-4070, 2022 04 05.
Artigo em Inglês | MEDLINE | ID: mdl-35258957

RESUMO

Biological treatment of waterborne viruses, specifically grazing of viruses by protists, can enhance microbial water quality while avoiding the production of toxic byproducts and high energy costs. However, tangible applications are limited by the lack of understanding of the underlying mechanisms. Here, we examined the feeding behavior of Tetrahymena pyriformis ciliates on 13 viruses, including bacteriophages, enteric viruses, and respiratory viruses. Significant differences in virus removal by T. pyriformis were observed, ranging from no removal (Qbeta, coxsackievirus B5) to ≥2.7 log10 (JC polyomavirus) after 48 h of co-incubation of the protist with the virus. Removal rates were conserved even when protists were co-incubated with multiple viruses simultaneously. Video analysis revealed that the extent of virus removal was correlated with an increase in the protists' swimming speed, a behavioral trait consistent with the protists' response to the availability of food. Protistan feeding may be driven by a virus' hydrophobicity but was independent of virus size or the presence of a lipid envelope.


Assuntos
Tetrahymena pyriformis , Vírus , Eucariotos , Natação , Qualidade da Água
15.
J Hazard Mater ; 431: 128558, 2022 06 05.
Artigo em Inglês | MEDLINE | ID: mdl-35228074

RESUMO

Quantitative structure-activity relationship (QSAR) modeling has been widely used to predict the potential harm of chemicals, in which the prediction heavily relies on the accurate annotation of chemical structures. However, it is difficult to determine the accurate structure of an unknown compound in many cases, such as in complex water environments. Here, we solved the above problem by linking electron ionization mass spectra (EI-MS) of organic chemicals to toxicity endpoints through various machine learning methods. The proposed method was verified by predicting 50% growth inhibition of Tetrahymena pyriformis (T. pyriformis) and liver toxicity. The optimal model performance obtained an R2 > 0.7 or balanced accuracy > 0.72 for both the training set and test set. External experimentation further verified the application potential of our proposed method in the toxicity prediction of unknown chemicals. Feature importance analysis allowed us to identify critical spectral features that were responsible for chemical-induced toxicity. Our approach has the potential for toxicity prediction in such fields that it is difficult to determine accurate chemical structures.


Assuntos
Elétrons , Tetrahymena pyriformis , Aprendizado de Máquina , Compostos Orgânicos/toxicidade , Relação Quantitativa Estrutura-Atividade
16.
Curr Microbiol ; 79(2): 61, 2022 Jan 04.
Artigo em Inglês | MEDLINE | ID: mdl-34982197

RESUMO

This study investigated the effects of gamma-radiation on Tetrahymena pyriformis. The experimental approach consists of exposing T. pyriformis growing in presence of Cesium-137 (137Cs) at dose rates of 1, 2, 4, and 6 cGy h-1 and Cobalt-60 (60Co) at dose rates of 8, 10, 15, and 20 cGy h-1. The radiation doses effects on growth, morphology, some metabolic enzymes, and reactive oxygen species (ROS) markers have been evaluated. When cells were growing in irradiating conditions at dose rates beyond 4 cGy h-1, a decreasing of cells and generation numbers with a prolongation of generation time and a change of morphological aspect with rounding-off of cells were observed compared to the control. The 50%-inhibitory dose (ID50) for radiation was estimated at 1568.72 ± 158.45 cGy. The gamma-radiation at dose rates more than 6 cGy h-1, affected both glyceraldehyde 3-phosphate dehydrogenase and succinate dehydrogenase by inhibiting their activities. All of these effects were more pronounced when cells were irradiated at the dose rate of 20 cGy h-1 using 60Co source. For ROS markers generated by gamma-radiation in T. pyriformis, the results showed an increase of the lipid peroxidation in cells grown in presence of gamma-radiation at dose rates more than 6 cGy h-1 and an enhancement in catalase and superoxide dismutase activities from the dose rate of 1 cGy h-1. These encouraging results suggested the use of T. pyriformis as a unicellular model cell to investigate other aspects of the response to ionizing radiation.


Assuntos
Tetrahymena pyriformis , Radioisótopos de Césio , Radioisótopos de Cobalto , Relação Dose-Resposta à Radiação , Raios gama
17.
Dokl Biochem Biophys ; 507(1): 334-339, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36786997

RESUMO

The effects of extracts of ten plant species from Russia and five species from Vietnam on the growth and survival of ciliates Tetrahymena pyriformis were studied. T. pyriformis belongs to the subkingdom Protozoa, which also includes pathogens of protozoan infections. Extraction of dried plants was carried out with acidic and alkaline aqueous solutions, as well as with an aqueous ethanol. Various amounts of extracts were added to the ciliate cells, and the number of cells survived after incubation for 1 and 24 h was recorded. We found that our samples of several plants, including wormwood, harmala, and licorice, similarly to those studied earlier, exhibit antiprotozoal activity, which may indicate that the secondary metabolites are the same in plants from different regions. Using the ciliate T. pyriformis as a model organism, the presence of antiprotozoal activity in extracts of lilac, chondrilla, cinquefoil, hop, and elm was shown for the first time.


Assuntos
Antiprotozoários , Extratos Vegetais , Plantas , Federação Russa , Plantas/química , Antiprotozoários/química , Antiprotozoários/farmacologia , Extratos Vegetais/química , Extratos Vegetais/farmacologia , Tetrahymena pyriformis/efeitos dos fármacos
18.
Appl Environ Microbiol ; 88(2): e0166521, 2022 01 25.
Artigo em Inglês | MEDLINE | ID: mdl-34731052

RESUMO

Vibrio vulnificus is an opportunistic human pathogen and autochthonous inhabitant of coastal marine environments, where the bacterium is under constant predation by heterotrophic protists or protozoans. As a result of this selection pressure, genetic variants with antipredation mechanisms are selected for and persist in the environment. Such natural variants may also be pathogenic to animal or human hosts, making it important to understand these defense mechanisms. To identify antipredator strategies, 13 V. vulnificus strains of different genotypes isolated from diverse environments were exposed to predation by the ciliated protozoan Tetrahymena pyriformis, and only strain ENV1 was resistant to predation. Further investigation of the cell-free supernatant showed that ENV1 acidifies the environment by the excretion of organic acids, which are toxic to T. pyriformis. As this predation resistance was dependent on the availability of iron, transcriptomes of V. vulnificus in iron-replete and iron-deplete conditions were compared. This analysis revealed that ENV1 ferments pyruvate and the resultant acetyl-CoA leads to acetate synthesis under aerobic conditions, a hallmark of overflow metabolism. The anaerobic respiration global regulator arcA was upregulated when iron was available. An ΔarcA deletion mutant of ENV1 accumulated less acetate and, importantly, was sensitive to grazing by T. pyriformis. Based on the transcriptome response and quantification of metabolites, we conclude that ENV1 has adapted to overflow metabolism and has lost a control switch that shifts metabolism from acetate excretion to acetate assimilation, enabling it to excrete acetate continuously. We show that overflow metabolism and the acetate switch contribute to prey-predator interactions. IMPORTANCE Bacteria in the environment, including Vibrio spp., interact with protozoan predators. To defend against predation, bacteria evolve antipredator mechanisms ranging from changing morphology, biofilm formation, and secretion of toxins or virulence factors. Some of these adaptations may result in strains that are pathogenic to humans. Therefore, it is important to study predator defense strategies of environmental bacteria. V. vulnificus thrives in coastal waters and infects humans. Very little is known about the defense mechanisms V. vulnificus expresses against predation. Here, we show that a V. vulnificus strain (ENV1) has rewired the central carbon metabolism, enabling the production of excess organic acid that is toxic to the protozoan predator T. pyriformis. This is a previously unknown mechanism of predation defense that protects against protozoan predators.


Assuntos
Tetrahymena pyriformis , Vibrio vulnificus , Acetatos , Animais , Genótipo , Comportamento Predatório
19.
SAR QSAR Environ Res ; 32(7): 541-571, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-34157880

RESUMO

Avermectins have been effectively used in medicine, veterinary medicine, and agriculture as antiparasitic agents for many years. However, there are still no reliable data on the main ecotoxicological characteristics of most individual avermectins. Although many QSAR models have been proposed to describe the acute toxicity of organic compounds towards Tetrahymena pyriformis (T. pyriformis), avermectins are outside the applicability domain of these models. The influence of the molecular structures of various organic compounds on the acute toxicity towards T. pyriformis was studied using the OCHEM web platform (https://ochem.eu). A data set of 1792 toxicants was used to create models. The QSAR (Quantitative Structure-Activity Relationship) models were developed using the molecular descriptors Dragon, ISIDA, CDK, PyDescriptor, alvaDesc, and SIRMS and machine learning methods, such as Least Squares Support Vector Machine and Transformer Convolutional Neural Network. The HYBOT descriptors and Random Forest were used for a comparative QSAR investigation. Since the best predictive ability was demonstrated by the Transformer Convolutional Neural Network model, it was used to predict the toxicity of individual avermectins towards T. pyriformis. During a structural interpretation of the developed QSAR model, we determined the significant molecular transformations that increase and decrease the acute toxicity of organic compounds.


Assuntos
Antiprotozoários/farmacologia , Ivermectina/análogos & derivados , Relação Quantitativa Estrutura-Atividade , Tetrahymena pyriformis/efeitos dos fármacos , Antiprotozoários/química , Bases de Dados de Compostos Químicos , Ivermectina/química , Ivermectina/farmacologia , Testes de Toxicidade Aguda
20.
Dokl Biochem Biophys ; 497(1): 104-107, 2021 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-33895924

RESUMO

The cytotoxicity of doxorubicin (Dox) and its peptide modifications Z-Gly-Pro-Dox and Boc-Gly-Pro-Dox were studied. Tetrahymena pyriformis was used as a test system, which made it possible, due to the short life cycle and high reproduction rate of ciliates, to trace their response to the effects of toxicants over several generations. It was found that peptide modification of the Dox molecule markedly reduces its cytotoxic and cytostatic effect. The Z-Gly-Pro-Dox modification has less cytotoxic and cytostatic effect compared to Boc-Gly-Pro-Dox. When determining the ability of drugs (at a concentration of 100 µM) to prevent bacterial contamination of samples, it was shown that the smallest degree of overgrowth was recorded in the presence of Dox (OD600nm 81.1). Boc-Gly-Pro-Dox also had a bacteriostatic effect, though less pronounced (OD600nm 93.8). The degree of overgrowth in the presence of Z-Gly-Pro-Dox was close to that of distilled water. The results obtained on ciliates did not contradict the data obtained in similar studies on mice.


Assuntos
Citotoxinas/química , Citotoxinas/toxicidade , Doxorrubicina/química , Doxorrubicina/toxicidade , Peptídeos/química , Tetrahymena pyriformis/efeitos dos fármacos , Animais , Relação Dose-Resposta a Droga , Camundongos , Relação Estrutura-Atividade
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